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Waleed Mohammed - PhD student
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Waleed Mohammed

PhD student
Kazan Federal University • Kazan • Russia

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • Arabic
  • English
  • Russian
Programming languages
  • MATLAB

Fields of interest

WGS analysis
Prioritizes cancer gene by integrating diverse data types on a directed…
Computes positively selected candidate variants for functional follow-up.…
Consists in a benchmark dataset. Syndip has been designed from high-quality…
De novo sequencing analysis
Provides independent C++ implementations of the SUPERB algorithm for counting…
Enables genotyping and variant annotation of resequencing data produced by…
Provides assistance for predicting multi locus sequence type (MLST) of genomes.…
Metagenomic sequencing analysis
Proposes an iterative approach to assembling metagenomic datasets. Spherical…
Indexes very large and repetitive references to align short reads to them very…
Makes base calls in low coverage regions. PBHoover is a consensus and…