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Muhamad Fachrul - Student
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Muhamad Fachrul

Student
Indonesia International Institute for Life Sciences¬† • Jakarta • Indonesia

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
Programming languages
  • Python

Fields of interest

WGS analysis
Performs automated joint deconvolution and phylogeny inference of tumor genomic…
Genotype tandem repeats (TRs) at population scale. GtTR is a probabilistic…
Enables distributed, likelihood-free inference for computationally demanding…
RNA-seq analysis
Discovers low-rank biclusters within a large data-matrix. This method can be…
Improves comparability of DNA microarray data and RNA-seq datasets. FSQN…
Detects RNA editing by learning and summarizing essential features from the…
Metagenomic sequencing analysis
Produces maximum-likelihood phylogenetic trees and their associated distance…
Allows to simulate the effects of reaction inhibition across different stages…
Provides a tool for the inference of viral transmissions. QUENTIN incorporates…