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Muhammad Yasir - Researcher
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Muhammad Yasir

Researcher
King Abdulaziz University • Jeddah • Saudi Arabia

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • English
Programming languages
  • Other

Fields of interest

WGS analysis
Provides a read alignment software for whole genome sequencing (WGS). CS-BWAMEM…
Permits exome, whole-genome, and targeted sequencing analyses. Mosdepth is a…
Clusters tumors based on the somatic mutation spectra of the putative cancer…
De novo sequencing analysis
Enhances sequencing depth in low coverage areas with CIGAR string correction.…
Performs a structural annotation of protein-coding genes. TGFam-Finder…
Formulates haplotype assembly as sparse tensor decomposition. AltHap is a…
Metagenomic sequencing analysis
Designs probe sets for whole genome capture of highly diverse target sequences…
Allows to detect gene families in transcriptomes under strong selection. FUSTr…
Determines bacterial plasmid sequences in genomic and metagenomic assemblies.…