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Muhammad shah - metagenomic analysis of sewage water
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Muhammad shah

metagenomic analysis of sewage water
King Abdulaziz University • Jeddah • Saudi Arabia

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • English

Fields of interest

WGS analysis
Provides a standardized folder structure for data storage in experimental…
Permits users to cluster and visualize samples based on DNA mismatch patterns.…
Provides independent C++ implementations of the SUPERB algorithm for counting…
De novo sequencing analysis
Allows users to isolate Y chromosome specific reads for the assembler. RecoverY…
Allows generation and evaluation of phylogenetic trees. UBCG is based on the…
Investigates mutational signatures in cancer samples. MuSiCa includes options…
Metagenomic sequencing analysis
Deduces phylogenetic in the human immunodeficiency virus (HIV) drug resistance…
Serves for Illumina short read sequencing data. PriLive allows users to remove…
Assists users in predicting the Salmonella minimum inhibitory concentration…