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Murat Ozturk - PhD student
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Murat Ozturk

PhD student
Indiana University System • Indiana University Bloomington • Bloomington • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • BS-seq analysis
  • DNA methylation array analysis
Languages
  • English
Programming languages
  • C++
  • Python

Fields of interest

WGS analysis
Consists in a benchmark dataset. Syndip has been designed from high-quality…
Leverages adjacent normal tissue from tumor biopsies. LumosVar has seven steps:…
Automatically combines transcriptomes from difference sources, such as assembly…
BS-seq analysis
Makes base calls in low coverage regions. PBHoover is a consensus and…
Serves for the analysis of whole genome bisulfite sequencing (WGBS) data and…
Assists users in optimized block trimming. This algorithm is a polynomial-time…
DNA methylation array analysis
Models data to maintain realistic patterns of variation and correlation. FANGS…
Determines the toxicity related end-points of nanoparticles (NPs). toxFlow is…
Allows to rank, filter and explore cancer genomics data (genes, cell lines and…