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Natalia Rubanova

Paris Diderot University • Paris • France

Skills and expertise

Fields of interest
  • ChIP-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
  • English
  • Russian
Programming languages
  • Java
  • Python
  • R

Fields of interest

ChIP-seq analysis
Aims to represent a family of aligned protein sequences or a collection of…
Allows users to optimize a scoring function for pairwise-profile alignment…
Enhances sequencing depth in low coverage areas with CIGAR string correction.…
Gene expression array analysis
Permits removing electrical stimulation artifacts from multielectrode array…
Predicts de novo profile generation based on sequence context. SPBuild…
Measures genomic features such as gene expression levels over time. DPGP is a…
Protein interaction analysis
Serves for identifying regulons and validating gene regulatory networks.…
Predicts adenosine-5’-triphosphate (ATP) specific binding sites. ATPbind…
Predicts drug–target binding affinity using only sequences of proteins and…