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Nichole Johnston - graduate student
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Nichole Johnston

graduate student
Yale University • New Haven • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • English

Fields of interest

WGS analysis
TProvides a web app designed for the prediction of eukaryotic selenocysteine…
Integrates prior knowledge to learn mixed graphical models. piMGM provides an…
Generates realistic Illumina reads via a sequencing simulator. InSilicoSeq…
De novo sequencing analysis
Extends the Integrative Genomics Viewer (IGV) with feature for curation…
Allows to scale genome-wide analysis. Dot2dot is an algorithm for tandem repeat…
Allows users to extract a statistically significant subset of a determined set…
Metagenomic sequencing analysis
Constructs and publishes websites for synteny block analyses by exploiting…
Allows users to perform de novo discovery of k-mer set memories (KSMs). KMAC is…
Permits to analyze large species-wide bacterial population genomic datasets.…