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Nicolás Lazarte - phD student, currently working on NGS data assembly and visualization of bacterial genomes
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Nicolás Lazarte

phD student, currently working on NGS data assembly and visualization of bacterial genomes
Ministry of Science, Technology and Productive Innovation • National Scientific and Technical Research Council • Buenos Aires • Argentina

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • English
  • Spanish
Programming languages
  • Perl
  • Python
  • Visual Basic

Fields of interest

WGS analysis
Provides a visualization engine module. genomeview was developed for both…
Performs tree reconstruction based on the supermatrix paradigm. OneTwoTree is a…
Analyses genome wide association studies (GWAS) signals and determines…
De novo sequencing analysis
Identifies putatively cooperative transcription factor (TF) pairs co-occurring…
Implements several different transition kernels for updating a phylogenetic…
Provides a tool for the inference of viral transmissions. QUENTIN incorporates…
RNA-seq analysis
Identifies combined sequence and structure motifs. SMARTIV associates the RNA…
Allows users to determine gene ontology (GO) annotations for incompletely…
Serves as a dynamic alignment-free and reference-free read compression tool.…