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Nicolas Pope - Empirical Modelling Research
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Nicolas Pope

Empirical Modelling Research
University of Turku • Turku • Finland

Skills and expertise

Fields of interest
  • Synthetic biology
  • MS-based untargeted metabolomics
  • Protein interaction analysis
Languages
  • English
Programming languages
  • C
  • C++
  • Java
  • Javascript

Fields of interest

Synthetic biology
Enables synthetic gene designers to evaluate their own constructs and put codon…
Deduces the "lab-of-origin" of DNA sequence datasets. predict-lab-origin is an…
Offers a methodology for understanding how different parameters can affect the…
MS-based untargeted metabolomics
Provides a package for metabolic modeling of microbial communities. Micom…
Consists of a parsimonious charge deconvolution algorithm that produces fewer…
Permits metabolite identification from both unlabeled and stable-isotope…
Protein interaction analysis
Allows users to forecast interacting proteins. IAS is an application proposing…
Finds gene sets with statistically significant changes in functional…
Consists of a Bayesian shrinkage approach and an associated expectation…