Unlock your biological data

?
Nicolas Terrapon's avatar image
Nicolas Terrapon - Junior Professor / Researcher in the team that maintains the CAZy database
Nicolas Terrapon's avatar image
Upload a photo

Nicolas Terrapon

Junior Professor / Researcher in the team that maintains the CAZy database
Aix-Marseille University • Marseille • France

Skills and expertise

Fields of interest
  • WGS analysis
  • Metagenomic sequencing analysis
  • aCGH data analysis
Languages
  • English
  • French
Programming languages
  • C++
  • PHP
  • R

TOOLS MAINTAINED

PULDB

Dataset

PULDB / Polysaccharide-Utilization Loci DataBase

(0) 0 discussion(s)
Compiles information about polysaccharide utilization locus. PULDB provides a repository, part of the CAZy database, for over 3900 PUL predictions in more than 70 species. The database provides the…

Fields of interest

WGS analysis
Simulates phenotypes under different models including genetic variant effects…
Designs polymerase chain reaction (PCR) primers from DNA sequence.…
Evaluates gene-phenotype associations from large and mixed cohorts of patients.…
Metagenomic sequencing analysis
Maps positions and detects nucleotide within PacBio and ONT sequences. MetaMaps…
Allows users to realize accurate predictions. RIFRAF is an algorithm that can…
Consists of an alignment-free functional binning and abundance estimation…
aCGH data analysis
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…
Combines several steps for a high-quality probe and primer design for a variety…
Permits user to work on segmentation of genomic and epigenomic profiles. iSeg…