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Nika Abdollahi - Phd student
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Nika Abdollahi

Phd student
French National Centre for Scientific Research • Paris • France

Skills and expertise

Fields of interest
  • Immune system analysis
  • WGS analysis
  • RNA-seq analysis
Languages
  • English
  • French
Programming languages
  • C
  • C++
  • Python
  • R

Fields of interest

Immune system analysis
Enables users to predict of epitope-specific T-cell receptor (TCR) sequences.…
Detects perturbed molecular processes in complex human diseases. MultiPLIER…
Assembles and serves for visualization of known immune response to a specific…
WGS analysis
Assists users to perform colocalization of genomic features. Coloc-stats is a…
Provides a web platform to execute analysis of somatic DNA mutations with…
Generates realistic Illumina reads via a sequencing simulator. InSilicoSeq…
RNA-seq analysis
Filters spurious variants caused by mouse reads in patient-derived xenografts…
Compares differential abundance and expression methods on a targeted dataset.…
Predicts de novo profile generation based on sequence context. SPBuild…