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Nikos Sidiropoulos - PhD Student
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Nikos Sidiropoulos

PhD Student
University of Copenhagen • Copenhagen • Denmark

Skills and expertise

Fields of interest
  • WGS analysis
  • BS-seq analysis
  • aCGH data analysis
Languages
  • English
Programming languages
  • Python
  • R

Fields of interest

WGS analysis
Makes comparison between polygenicity across allele frequencies and functional…
Offers a method for detecting mutational signatures. SparseSignatures is a…
Generates and handles bioinformatics pipelines. STAPLER includes an assortment…
BS-seq analysis
Integrates both phenotypic measurements and genetic variants as features for…
Annotates and filtrates variant files. VarAFT allows the comparison of several…
Predicts de novo profile generation based on sequence context. SPBuild…
aCGH data analysis
Consists of a Bayesian, unsupervised, integrative clustering model for…
Combines several steps for a high-quality probe and primer design for a variety…
Analyzes next-generation sequencing (NGS) from experiments using unique…