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Saqib Nizami - research associate
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Saqib Nizami

research associate
Memorial Sloan Kettering Cancer Center • New York City • United States of America

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • scRNA-seq analysis
  • Gene expression microarray analysis
Languages
  • English
Programming languages
  • R

Fields of interest

RNA-seq analysis
Identifies protein-lncRNA interactions. PLIPCOM is constructed from three…
Discovers large indels using optical maps (OM) reads with weak signal. OMIndel…
Identifies genetic variants that overlap with genes coding for lincRNA or miRNA…
scRNA-seq analysis
Enables interrogation of multiple single-cell (scRNA-Seq) datasets. scMerge is…
Offers an imputation technique for single cell RNAseq (scRNAseq) data. deepMC…
Enables researchers to assign a cell type to each cell in an experiment. CaSTLe…
Gene expression microarray analysis
Assists users for visualizing ancestry data. AncestryView first proceeds by…
Provides a pattern recognition for cell-free DNA (cfDNA). CfdnaPattern is an…
Permits users to accelerate the construction of coexpression networks on modern…