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Noam Shani - Culture collection
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Noam Shani

Culture collection
Agroscope • Bern • Switzerland

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • English
  • French
Programming languages
  • R

Fields of interest

WGS analysis
Discovers copy number variations (CNV) in whole genome next generation…
Serves for an end-to-end multiparty computation (MPC) protocol for secure…
Genotype tandem repeats (TRs) at population scale. GtTR is a probabilistic…
RNA-seq analysis
Constructs publication-quality visualizations from Cuffdiff, edgeR, and DESeq2.…
Simplifies the execution of existing short read aligners (SRA) on…
Enables visualization and exploration of next-generation sequencing (NGS) data.…
Metagenomic sequencing analysis
Allows users to compare genomic structures and annotations across multiple…
Serves as a fully automatic analysis of protein family conservation within a…
Aims to represent a family of aligned protein sequences or a collection of…