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Ondřej Cvacho - PhD student
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Ondřej Cvacho

PhD student
Czech Technical University in Prague • Prague • Czech Republic

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • BS-seq analysis
  • English
Programming languages
  • C++

Fields of interest

WGS analysis
Enables distributed, likelihood-free inference for computationally demanding…
Assists users to perform colocalization of genomic features. Coloc-stats is a…
Serves as a scalable composition tool for implementing asynchronous Boolean…
De novo sequencing analysis
Provides a multi-assembler and multi-kmer protocol. Oyster River Protocol…
Allows users to distinguish human and mouse reads in High-Throughput Sequencing…
Rectifies errors in long-read sequences. FMLRC employs the FM-index to…
BS-seq analysis
Allows to detect gene families in transcriptomes under strong selection. FUSTr…
Serves as a dynamic alignment-free and reference-free read compression tool.…
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…