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Anastasiia Onyshchenko - Working on diatom genomes
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Anastasiia Onyshchenko

Working on diatom genomes
University of Arkansas System • University of Arkansas at Fayetteville • Fayetteville • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • aCGH data analysis
Languages
  • English
Programming languages
  • R
  • Shell (Bash)

Fields of interest

WGS analysis
Provides an alignment-free single nucleotide polymorphism (SNP) genotyping…
Deduces phylogenetic in the human immunodeficiency virus (HIV) drug resistance…
Evaluates the possible tandem duplication random losses (TDRLs) for a pair of…
De novo sequencing analysis
Investigates mutation count data to assess the signatures of mutational…
Allows users to extract a statistically significant subset of a determined set…
Consists of a method for comparing trees whose labels belong to a pre-defined…
aCGH data analysis
Permits user to work on segmentation of genomic and epigenomic profiles. iSeg…
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…