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Oscar Dias - Invited Assistant Researcher
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Oscar Dias

Invited Assistant Researcher
Corporate Executive Board (United States) • Arlington • United States of America

Skills and expertise

Fields of interest
  • Drug design
  • Synthetic biology
  • Metagenomic sequencing analysis
Languages
  • English
  • Portuguese
Programming languages
  • Java
  • MATLAB
  • Python

Favorites and Collections

Favorites

merlin
Desktop

Collections

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Bioinformatics projects

TOOLS MAINTAINED

merlin

Desktop

merlin / metabolic models reconstruction using genome-scale information

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Enables users to reconstruct genome-scale metabolic models for any organism that has its genome sequenced. merlin is composed of two main modules, (1) one developed specifically to help on the genome…

Fields of interest

Drug design
Serves as a Chembench module for quantitative structure-activity relationship…
Constructs and investigates pairwise residue interaction energy data from…
Analyses and compares protein dynamics obtained from molecular dynamics (MD)…
Synthetic biology
Assists users in experimental design in microplate experiments. PlateDesigner…
Designs oligonucleotides for targeted integration using the pGTag vector suite.…
Allows modular assembly of Golden Gate-compatible cloning broad-host range…
Metagenomic sequencing analysis
Discovers, delineates and structures metagenomic species pangenomes (MSPs) from…
Predicts de novo profile generation based on sequence context. SPBuild…
Allows users to perform reconstruction of phylogenetic trees and ancestral…