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Pâmela Alexandre - PhD student
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Pâmela Alexandre

PhD student
Australian Government • Commonwealth Scientific and Industrial Research Organisation • Canberra • Australia

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Protein interaction analysis
Languages
  • English
  • Portuguese

Fields of interest

De novo sequencing analysis
Provides assistance for comparative analysis of draft genomes. Pan4Draft…
Leverages adjacent normal tissue from tumor biopsies. LumosVar has seven steps:…
Maps bisulfite-treated short DNA reads to a reference genome. BisPin supports…
RNA-seq analysis
Provides a de novo assembler. STAble is composed of three modules: (1)…
Predicts de novo profile generation based on sequence context. SPBuild…
Provides a quick navigation into any set of scores associated to the…
Protein interaction analysis
Allows users to predict heme binding residues (HEMEs). For HEMEsPred, several…
Builds genome-minimized strains. MinGenome excludes metabolic and regulatory…
Decomposes the sources of heterogeneity in multi-omics data sets. MOFA…