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Panagiotis Mantas - Genomics, Transcriptomics
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Panagiotis Mantas

Genomics, Transcriptomics
European Molecular Biology Laboratory • Heidelberg • Germany

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • NMR-based proteomics analysis
  • English
Programming languages
  • Python
  • R

Fields of interest

WGS analysis
Detects variant somatic and germline origin in cancer specimens. SGZ is a…
Identifies insertions and deletions (indels) from DNA-seq or RNA-seq data.…
Executes allele-specific alignment of a set of reads to two reference genomes.…
RNA-seq analysis
Enables utilization of available data and accurate inference of species tree…
Serves to ChIP-seq Wig data. Wig is a standard file format, which in this…
Provides a tool to select the band width according to the read’s error rates.…
NMR-based proteomics analysis
Assists users to perform spectra analysis. Dumpling comprises the following…
Automates the elimination of noise peaks. Filt Robot employs convolutional…
Performs general ensemble-based validation step and a simple and…