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Pantelis Topalis - Genomicist
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Pantelis Topalis

Genomicist
Foundation for Research and Technology Hellas • Ir├íkleion • Greece

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • ChIP-seq analysis
Languages
  • English
Programming languages
  • Perl
  • Python
  • R

Fields of interest

De novo sequencing analysis
Provides a general foundation for representation, processing, and model-free…
Furnishes a solution for determining transcription factor binding sites (TFBS)…
Creates a gene tree by combining a set of trees on partial, possibly…
RNA-seq analysis
Identifies genetic variants that overlap with genes coding for lincRNA or miRNA…
Deduces gene regulations by exploiting time-series gene expression data.…
Visualizes balances of compositional data using an alternative to the balance…
ChIP-seq analysis
Deduces gene regulations by exploiting time-series gene expression data.…
Furnishes a solution for determining transcription factor binding sites (TFBS)…
Provides a conversion tool for GFF3 tool to legal EMBL format suitable for…