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Partho Sen - Postdoc Computational Biology
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Partho Sen

Postdoc Computational Biology
Turku Centre for Biotechnology • Turku • Finland

Skills and expertise

Fields of interest
  • Immune system analysis
  • Metagenomic sequencing analysis
  • MS-based untargeted metabolomics
Languages
  • English
Programming languages
  • C++
  • Java
  • MATLAB
  • PHP
  • R

Fields of interest

Immune system analysis
Serves for determining the binding of peptides to major histocompatibility…
Highlights antibodies with anomalous values compared to therapeutics. TAP…
Detects perturbed molecular processes in complex human diseases. MultiPLIER…
Metagenomic sequencing analysis
Optimises the agreement between gene models for orthologous genes in multiple…
Facilitates phylostratigraphic analysis. phylostratr automates sequence…
Provides a tool for ortholog identification. JustOrthologs focuses on orthologs…
MS-based untargeted metabolomics
Enables the detection of regulated modules in metabolomics networks at…
Provides a package for metabolic modeling of microbial communities. Micom…
Explains the activity of metabolic modules. Metabolizer takes into account the…