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Pascal Duijf - Cancer Genomics
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Pascal Duijf

Cancer Genomics
University of Queensland • Brisbane • Australia

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • R

Fields of interest

WGS analysis
Permits researchers to conduct investigation and construct high-quality…
Finds pathway genes from KEGG pathway database. KPGminer retrieves constituent…
Enables computation of kinship from the founder inbreeding coefficients. PedKin…
RNA-seq analysis
Enables genotyping and variant annotation of resequencing data produced by…
Permits cluster identification using ensemble clustering. diceR assists users…
Optimises the agreement between gene models for orthologous genes in multiple…
Protein interaction analysis
Gathers a set of statistical functions dedicated to the evaluation of…
Identifies methylation quantitative trait loci at high sensitivity. tICA…
Finds gene sets with statistically significant changes in functional…