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Pedro Araújo - HIV-1 phylodynamics
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Pedro Araújo

HIV-1 phylodynamics
University of Minho • Braga • Portugal

Skills and expertise

Fields of interest
  • Synthetic biology
  • Immune system analysis
  • WGS analysis
  • English
  • Portuguese
Programming languages
  • Python

Fields of interest

Synthetic biology
Allows modular assembly of Golden Gate-compatible cloning broad-host range…
Deduces the "lab-of-origin" of DNA sequence datasets. predict-lab-origin is an…
Aims to assemble multiple DNA fragments in a single reaction using a…
Immune system analysis
Provides several applications based on a Bayesian Markov Chain Monte Carlo…
Offers a method for measuring variant surface glycoprotein (VSG) diversity…
Consists of an open-source deep learning model. MHCSeqNet is a program that can…
WGS analysis
Produces maximum-likelihood phylogenetic trees and their associated distance…
Extends the Integrative Genomics Viewer (IGV) with feature for curation…
Allows purity estimation of cancer samples from their DNA methylation profile.…