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PengGongxin - data mining
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Open to new opportunities

PengGongxin

data mining
China Academy of Chinese Medical Sciences • Beijing • China

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • Chinese
  • English
Programming languages
  • C++
  • Python

Fields of interest

De novo sequencing analysis
Performs automated joint deconvolution and phylogeny inference of tumor genomic…
Optimizes the global minimal genetic distance in a given population. MITOMIX…
Integrates multiple assayed transcription factors (TFs) bound/unbound DNA…
RNA-seq analysis
Allows users to distinguish human and mouse reads in High-Throughput Sequencing…
Finds differentially expressed (DE) genes that avoids some of the shortcomings…
Serves as a dynamic alignment-free and reference-free read compression tool.…
Metagenomic sequencing analysis
Gathers DNA sequences via clustering. STARS uses K-means algorithm and GSP…
Permits parallel, fine-grained pairwise alignment of metagenomes. IMSAME is a…
Automatically combines transcriptomes from difference sources, such as assembly…