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Frédéric Plewniak - bioinformatics
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Frédéric Plewniak

bioinformatics
French National Centre for Scientific Research • Paris • France

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • Protein interaction analysis
Languages
  • English
  • French
Programming languages
  • Python

Fields of interest

RNA-seq analysis
Enables scalable mapping of very large RNA-seq datasets on distributed memory…
Determines transcript-level abundance on reduced-representation expression…
Allows users to perform reconstruction of phylogenetic trees and ancestral…
Metagenomic sequencing analysis
Allows users to conduct large-scale comparisons of their results with thousands…
Provides a tool for the inference of viral transmissions. QUENTIN incorporates…
Simplifies the execution of existing short read aligners (SRA) on…
Protein interaction analysis
Predicts protein-ligand absolute affinity based on 3D-convotional neural…
Predicts protein cavity and allows functional analyses. CavityPlus can…
Provides a method based on fractal theory to count motifs in biological…