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Pradnya Nikam

trainee
National Centre for Microbial Resource • Pune • India

Skills and expertise

Fields of interest
  • Synthetic biology
  • RNA-seq analysis
  • DNA methylation array analysis
Languages
  • English

Fields of interest

Synthetic biology
Allows modular assembly of Golden Gate-compatible cloning broad-host range…
Enables synthetic gene designers to evaluate their own constructs and put codon…
Deduces the "lab-of-origin" of DNA sequence datasets. predict-lab-origin is an…
RNA-seq analysis
Allows comparison and separation of orthology relationships. CAT uses the…
Allows to compress DNA sequences, quality scores and read identifiers. FaStore…
Allows users to return all read mappings within a given edit distance. FEM is…
DNA methylation array analysis
Stores projects and creates a directory of analysed results and parameter.…
Allows users to compare genomic structures and annotations across multiple…
Enables to build custom genome browsers. GIVe is a programming library allowing…