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Prashant Kaushik - Transcriptomics
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Prashant Kaushik

Transcriptomics
Polytechnic University of Valencia • Valencia • Spain

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Gene expression array analysis
  • MS-based untargeted proteomics
Languages
  • English
Programming languages
  • Java
  • Perl
  • Python

Fields of interest

RNA-seq analysis
Enables users to compare the global and local biological signal of networks.…
Assists users in evaluating methods, particularly some data-driven methods or…
Allows generation and evaluation of phylogenetic trees. UBCG is based on the…
Gene expression array analysis
Normalizes measurement of long gene expression (LGE) within RNA-seq and…
Reproduces Gaussian clusters. Clusterlab is a customizable package, able to…
Provides a neighbor protein structure retrieval method. ContactLib scans…
MS-based untargeted proteomics
Identifies and quantifies spectral library members within data-independent…
Enables the application of gene set tests (GST) in the absence of large parts…
Quantifies histone peptides based on liquid chromatography - tandem mass…