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Philippe ROCHE - PI
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Philippe ROCHE

PI
French National Centre for Scientific Research • Paris • France

Skills and expertise

Fields of interest
  • Drug design
  • Synthetic biology
  • Protein interaction analysis
Languages
  • English
  • French
Programming languages
  • Perl
  • Python
  • Shell (Bash)

Bioinformatics projects

TOOLS MAINTAINED

2P2Idb

Dataset

2P2Idb

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A hand-curated structural database dedicated to protein-protein interactions with known orthosteric modulators. 2P2Idb includes all interactions for which both the protein-protein and protein-ligand…

Fields of interest

Drug design
Handles three-dimensional macromolecular data. LiteMol allows users to…
Assists users with virtual screening. BindScope is a web GPU-accelerated…
Serves as a Chembench module for quantitative structure-activity relationship…
Synthetic biology
Assists users in experimental design in microplate experiments. PlateDesigner…
Designs oligonucleotides for targeted integration using the pGTag vector suite.…
Allows modular assembly of Golden Gate-compatible cloning broad-host range…
Protein interaction analysis
Deduces target gene expression profiles using a conditional generative model.…
Enables the simplification and compression of graphs based on high frequency…
Allows the extraction of protein-protein interactions (PPIs) including…