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Ray Cui - Dr.
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Ray Cui

Max Planck Society • Max Planck Institute for Biology of Ageing • Köln • Germany

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • RNA-seq analysis
  • Chinese
  • English
Programming languages
  • C++
  • PHP
  • R

Reviews and Discussions


SV-STAT 2017-04-20, 22:55:26
Hello. We have 250x2 PE reads of the insert size ~400bp, and also mate pair libraries of 3kb, 7kb and 10kb inserts. Is it possible to use all of these reads jointly for detecting variations? I am…


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Fields of interest

WGS analysis
Assists users in reading TIGER-rate file or other rate files. RatePartitions…
Generates a population of 3D genome structures where each domain is represented…
Allows calculation of the state of any node in a phylogeny under the marginal…
De novo sequencing analysis
Simultaneously quantifies differences in differential transcription factor (TF)…
Provides several tools for processing phylogenetic. Gappa can automatically…
Implements the weight constrained and regularized convolutional filter layers.…
RNA-seq analysis
Provides an approach for integrating transcript assemblies. Mikado is a…
Allows users to process targeted enriched Illumina sequences from raw reads to…
Provides a library written in Nim programming language that suits for simple…