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Rebecca Brooker - Student
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Rebecca Brooker

University of London • London • United Kingdom

Skills and expertise

Fields of interest
  • Immune system analysis
  • WGS analysis
  • RNA-seq analysis
  • English
Programming languages
  • Python

Fields of interest

Immune system analysis
Enables analysis of multicell-per-well sequencing data. MAD-HYPE consists of a…
Models tumor immune evasion by integrating expression signatures of T cell…
Leverage features from local residue neighbourhoods and across the entire…
WGS analysis
Enables distributed, likelihood-free inference for computationally demanding…
Trains a decision tree from single nucleotide polymorphism database (dbSNP) and…
Finds transpositions given the alignments of second generation reads to a…
RNA-seq analysis
Enables visualization and exploration of next-generation sequencing (NGS) data.…
Allows integration and visualization of population genetics, mutation damage…
Performs prediction of master regulators. TETRAMER is a Cytoscape App that (i)…