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Rita Abou Abdallah - PhD
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Rita Abou Abdallah

PhD
Institute of Research for Development • Research Unit on Infectious and Emerging Tropical Diseases • Marseille 05 • France

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • aCGH data analysis
Languages
  • French

Fields of interest

WGS analysis
Recognizes cancer-related mutation clusters. DMCM is based on kernel density…
Provides inference of gene regulations using eQTLs as causal anchors by…
Allows to scale genome-wide analysis. Dot2dot is an algorithm for tandem repeat…
De novo sequencing analysis
Allows users to construct targeted pseudo-contigs generated by assembling reads…
Enables genotyping and variant annotation of resequencing data produced by…
Integrates multiple assayed transcription factors (TFs) bound/unbound DNA…
aCGH data analysis
Analyzes next-generation sequencing (NGS) from experiments using unique…
Consists of a Bayesian, unsupervised, integrative clustering model for…
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…