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RobinEllison

reconstruction of omics databases
Chinese Academy of Sciences • Beijing Institute of Genomics • Beijing • China

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • Chinese
  • English
Programming languages
  • Cython
  • Javascript
  • PHP
  • R

Fields of interest

De novo sequencing analysis
Provides a read alignment software for whole genome sequencing (WGS). CS-BWAMEM…
Makes base calls in low coverage regions. PBHoover is a consensus and…
Identifies, classifies and annotates transposable elements (TEs) of non-model…
RNA-seq analysis
Consists of a dimension reduction technique designed for complex data sets with…
Allows users to perform clustering analysis. NNC is a method based on k-means…
Allows generation and evaluation of phylogenetic trees. UBCG is based on the…
Metagenomic sequencing analysis
Enables phylogenetically informed classification of metagenomic sequences.…
Allows for reproducible, higher-resolution comparisons across studies.…
Allows users to realize accurate predictions. RIFRAF is an algorithm that can…