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Rodrigo Vidal - genomics animal production
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Rodrigo Vidal

genomics animal production
universidad de santiago • santiago • Chile

Skills and expertise

Fields of interest
  • Genome edition
  • RNA-seq analysis
  • DNA methylation array analysis
Languages
  • English
Programming languages
  • Python

TOOLS MAINTAINED

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Ssa miRNAs DB

Dataset

Ssa miRNAs DB

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Aims to provide information about microRNA (miRNA) in Altantic salmon. Ssa miRNAs DB is an online repository that contains an interactive interface for a convenient retrieval of each entry by…

Fields of interest

Genome edition
Desktop
ampliCan
Identifies, quantifies and visualizes genuine genome editing events form CRIPR…
Web
ICE
Processes batch analysis of CRISPR edits using Sanger data. ICE can quantify…
Web
PITCh designer
Designs and performs PITCh knock-in. PITCh designer is a streamlined pipeline…
RNA-seq analysis
Algorithm
SpliceVec
Serves for distributed feature representation of splice junctions by embedding…
Desktop
APAtrap
Identifies novel 3’ Untranslated Transcribed Region (UTR) and 3’ UTR…
Desktop
FMLRC
Rectifies errors in long-read sequences. FMLRC employs the FM-index to…
DNA methylation array analysis
Web
GSHR
Gathers investigations of phytohormone responses. GSHR employs the integration…
Web
toxFlow
Determines the toxicity related end-points of nanoparticles (NPs). toxFlow is…
Desktop
TPEA
Performs pathway enrichment analysis. TPEA evaluates the importance of nodes…

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