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Ruben Agrelo - PI
Open to new opportunities
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Open to new opportunities

Ruben Agrelo

PI
Institut Pasteur de Montevideo • Montevideo • Uruguay

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • BS-seq analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • Python

Fields of interest

RNA-seq analysis
Generates clustering trees and provides a visualization feature for…
Encodes string sequence into a mathematical representation. Nucl2Vec aims to…
Allows users to distinguish human and mouse reads in High-Throughput Sequencing…
BS-seq analysis
Enables genotyping and variant annotation of resequencing data produced by…
Filters spurious variants caused by mouse reads in patient-derived xenografts…
Identifies differentially methylated regions (DMRs). Defiant is a program that…
Protein interaction analysis
Predicts adenosine-5’-triphosphate (ATP) specific binding sites. ATPbind…
Allows global pairwise network alignment of protein-protein interactions (PPI)…
Calculates, compares, assorts, and visualizes network centrality measures…