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Ruchir Khandelwal - Systems Biology of Plants
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Ruchir Khandelwal

Systems Biology of Plants
Rijk Zwaan BV • Netherlands

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Protein interaction analysis
  • English
Programming languages
  • Python
  • Shell (Bash)

Fields of interest

WGS analysis
Identifies, characterizes, and quantifies various sources of erroneous…
Allows users to detect pairwise interactions across the genome. The REMMA…
Forecasts disease candidate genes. The approach is composed of a learning and a…
RNA-seq analysis
Identifies operons and conserved gene arrays in bacterial datasets. SLING…
Performs automated joint deconvolution and phylogeny inference of tumor genomic…
Implements an indexing data structure for compacted de Bruijn graph (dBG) and…
Protein interaction analysis
Investigates relationships between human diseases and microbial communities.…
Reveals hidden patterns of plant signaling dynamics. DiNAR is a program that…
Assists users to identify DNA methylation in distal regions with a causal…