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Rute Pereira - PhD student
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Rute Pereira

PhD student
University of Porto • Porto • Portugal

Skills and expertise

Fields of interest
  • Genome edition
  • WES analysis
  • Protein interaction analysis
Languages
  • English

Fields of interest

Genome edition
Assists users in predicting the off-target activities of CRISPR/Cas9 in…
Constructs optimal gRNAs for the CRISPR-Cpf1 system. CRISPR-DT can take into…
Creates and picks single-guide RNAs (sgRNAs) or template sequences for knockout…
WES analysis
Provides an online platform for collecting, managing, analyzing, visualizing…
Enables evaluation, filtering, and analysis of gene models, as well as…
Enhances sequencing depth in low coverage areas with CIGAR string correction.…
Protein interaction analysis
Facilitates phylostratigraphic analysis. phylostratr automates sequence…
Merges the information encoded in the kinase with the information encoded in…
Identifies network motif modules in integrated gene regulatory networks in…