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Ryan Holt

Student
Trent University • Peterborough • Canada

Skills and expertise

Fields of interest
  • WGS analysis
  • Metagenomic sequencing analysis
  • Protein interaction analysis
Languages
  • English

Reviews and Discussions

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SPAGeDi 2018-02-02, 18:10:25
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I'm currently attempting to use SPAGeDi to calculate blog and F(1), where blog is the…

Fields of interest

WGS analysis
Determines the percentage explained by variants and/or interactions of…
Analyzes structural variants (SVs) and allele-specific copy numbers of genomic…
Provides several tools for processing phylogenetic. Gappa can automatically…
Metagenomic sequencing analysis
Allows pathway-based analysis and visualization. PyPathway includes four…
Identifies pathogens in clinical next generation sequencing (NGS) datasets.…
Enables to build custom genome browsers. GIVe is a programming library allowing…
Protein interaction analysis
Allows global pairwise network alignment of protein-protein interactions (PPI)…
Merges the information encoded in the kinase with the information encoded in…
Predicts human microbe-disease associations. NCPHMDA is a non-parametric and…