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S. Alaimo - Bioinformatician
Open to new opportunities
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Open to new opportunities

S. Alaimo

Bioinformatician
University of Catania • Catania • Italy

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • Gene expression microarray analysis
Languages
  • English
  • Italian
Programming languages
  • C
  • C++
  • Java
  • Javascript
  • PHP
  • R
  • Shell (Bash)

TOOLS MAINTAINED

MITHrIL

Algorithm

MITHrIL / Mirna enrIched paTHway Impact anaLysis

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An algorithm developed for the analysis of signaling pathways. MITHrIL augments pathways with missing regulatory elements, such as microRNAs, and their interactions with genes. The method takes as…

Fields of interest

RNA-seq analysis
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
Assists users for annotating transcriptome and functional analysis of…
Enables exploration and classification of large collections of gene clusters.…
Metagenomic sequencing analysis
Enables the discovery, ranking, and clustering of colinear syntenic blocks…
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
Clarifies detailed evolutionary relationships between gene clusters. CORASON…
Gene expression microarray analysis
Assists users for annotating transcriptome and functional analysis of…
Enables exploration and classification of large collections of gene clusters.…
Changes nucleotide sequences into interactive browser-based two-dimensional…