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Shamith Samarajiwa - Research Group Leader (Computational Biology & Data Science)
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Shamith Samarajiwa

Research Group Leader (Computational Biology & Data Science)
University of Cambridge • Cambridge • United Kingdom

Skills and expertise

Fields of interest
  • Immune system analysis
  • WGS analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • C++
  • Perl
  • Python
  • R

Fields of interest

Immune system analysis
Trains pan-specific human leukocyte antigen (HLA)-peptide binding affinity…
Allows users to perform antibody library screening. TrueRepertoire is a…
Provides a model for antibody dependent cellular cytotoxicity (ADCC). ODE model…
WGS analysis
Investigates developmental epigenomes and transcriptomes that are related to De…
Encodes string sequence into a mathematical representation. Nucl2Vec aims to…
Combines structural variation (SV) calls from different algorithms to reduce…
Protein interaction analysis
Permits network reconstruction and quantification of networks in multiple cell…
Offers a method for clustering multi-omics data. NEMO is a package requiring…
Generates and analyzes executable models from single-cell gene expression data.…