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Sandeep k - Ph.D. Student
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Sandeep k

Ph.D. Student
Yenepoya University • Mangalore • India

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • MS-based untargeted proteomics
Languages
  • English
Programming languages
  • C#
  • Python

Fields of interest

De novo sequencing analysis
Considers DNA sequence information and chromatin accessibility data to forecast…
Validates scaffolding methods. Repeat aware scaffolding evaluation framework is…
Prioritizes disease genes for all phenotypes. IDPL aims to relieve the bias…
RNA-seq analysis
Enables multi-species orthology inference. SonicParanoid is a program that…
Predicts transcriptomic structural variants (TSVs) from RNA-seq data. SQUID is…
Determines the toxicity related end-points of nanoparticles (NPs). toxFlow is…
MS-based untargeted proteomics
Provides a quick navigation into any set of scores associated to the…
Allows to search in proteomics database. MetaMorpheus integrates…
Identifies chimeric (co-fragmented) peptide features that are common in complex…