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Sandra - Transcriptomic analysis of the gonad of the Crassostrea virginica oyster
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Sandra

Transcriptomic analysis of the gonad of the Crassostrea virginica oyster
Autonomous University of Baja California • Mexicali • Mexico

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • BS-seq analysis
  • Gene expression array analysis
Languages
  • Spanish

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Fields of interest

RNA-seq analysis
Assists users in evaluating methods, particularly some data-driven methods or…
Assists users in studying allele-specific expression (ASE) within individual…
Allows users to handle sequencing data with unique molecular identifiers…
BS-seq analysis
Enables genotyping and variant annotation of resequencing data produced by…
Allows users to perform quality control (QC) and diagnostic analyses of…
Predicts de novo profile generation based on sequence context. SPBuild…
Gene expression array analysis
Handles enrichment heatmaps. EnrichedHeatmap is an R package able to gather…
Permits cluster identification using ensemble clustering. diceR assists users…
Stores projects and creates a directory of analysed results and parameter.…