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Sara Savage - bioinformatics
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Sara Savage

bioinformatics
Harris Health System • Baylor College of Medicine • Houston • United States of America

Skills and expertise

Fields of interest
  • Immune system analysis
  • WGS analysis
  • BS-seq analysis
Languages
  • English
Programming languages
  • R

Fields of interest

Immune system analysis
Allows users to determine the clonal-family-specific substitution profile for…
Provides several applications based on a Bayesian Markov Chain Monte Carlo…
Determines interaction between T cell receptors (TCRs) and peptides presented…
WGS analysis
Enables linkage disequilibrium (LD) decay analysis. PopLDdecay allows…
Discovers the mean in a partition distribution. mean_partition is based on an…
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
BS-seq analysis
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
Integrates both phenotypic measurements and genetic variants as features for…
Annotates and filtrates variant files. VarAFT allows the comparison of several…