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Sean Formby - fungal data analysis
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Sean Formby

fungal data analysis
Vancouver Coastal Health Research Institute • University of British Columbia • Vancouver • Canada

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • BS-seq analysis
Languages
  • English

Fields of interest

De novo sequencing analysis
Enables distributed, likelihood-free inference for computationally demanding…
Includes implementations of the autopolyploid (diseq), allopolyploid (alloSNP),…
Allows users to distinguish human and mouse reads in High-Throughput Sequencing…
RNA-seq analysis
Forecasts potential long non-coding RNAs (lncRNAs) and environmental factors…
A robust rank-based classifier for gene expression classification. AUCTSP works…
Allows comparison and separation of orthology relationships. CAT uses the…
BS-seq analysis
Provides a library written in Nim programming language that suits for simple…
Supplies a protein homology search method alternative to BLAST. TOPAZ is a…
Provides a standard for bisulfite sequencing data related manipulation.…