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Sh1ne chen

Fujian Agriculture and Forestry University • Fuzhou • China

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Gene expression array analysis
  • Chinese
  • English
Programming languages
  • Java
  • Perl

Fields of interest

De novo sequencing analysis
Provides independent C++ implementations of the SUPERB algorithm for counting…
Assists for profiling circulating tumor DNA (ctDNA). NG-TAS features several…
Consists of a method for comparing trees whose labels belong to a pre-defined…
RNA-seq analysis
Provides a tool for the inference of viral transmissions. QUENTIN incorporates…
Predicts isoform expression on entirely held-out libraries. APARENT is a…
Simplifies downstream utilization of high-throughput sequencing (HTS) data.…
Gene expression array analysis
Provides a neighbor protein structure retrieval method. ContactLib scans…
Carries out gene expression correlation analysis. GECO is a web server that…
Enables evaluation, filtering, and analysis of gene models, as well as…