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Shang Zheming

Transcriptome
North West Agriculture and Forestry University • Yangling • China

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Gene expression array analysis
Languages
  • Chinese

Fields of interest

De novo sequencing analysis
Enables hierarchical multi-step assembly of large DNA fragments. MetClo uses…
Identifies and prioritises causal genes of loci associated with human disease.…
Deduces ancestral characters on a rooted phylogenetic tree. PastML can…
RNA-seq analysis
Allows users to return all read mappings within a given edit distance. FEM is…
Aims at providing a functional annotation tool for the genetic variation, using…
Promotes sparse variable selection via regularization governed by the…
Gene expression array analysis
Stores projects and creates a directory of analysed results and parameter.…
Calculates average amino-acid identity (AAI) between a query proteome and all…
Performs analyzes of high-throughput data from complex, heterogeneous tissues.…