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Shohag Barman - Work on Bioinformatics
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Shohag Barman

Work on Bioinformatics

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • C
  • C++
  • Java
  • MATLAB
  • Python

Fields of interest

RNA-seq analysis
Recognizes spatiotemporal relationships in the human brain. brainImageR offers…
Allows users to see expression profiles, to examine expression specificity,…
Encodes string sequence into a mathematical representation. Nucl2Vec aims to…
Gene expression array analysis
Consists of a dimension reduction technique designed for complex data sets with…
Consists of a genomic context explorer. GeneSpy is a program that aims to…
Permits cluster identification using ensemble clustering. diceR assists users…
Protein interaction analysis
Assists in analyses of gene regulator. This package offers R modules to (i)…
Predicts cancer-specific synthetic lethal (SL) interactions of any given…
Estimates the model parameters from experimental data, as well as to quantify…