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Somnath Shee - Mtb pathogenesis
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Somnath Shee

Mtb pathogenesis
Indian Institute of Science Bangalore • Bengaluru • India

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Gene expression array analysis
Languages
  • English

Fields of interest

WGS analysis
Allows to compress DNA sequences, quality scores and read identifiers. FaStore…
Allows users to measure polygenic risk scores (PRS). PRSoS provides enhanced…
Trains a decision tree from single nucleotide polymorphism database (dbSNP) and…
De novo sequencing analysis
Allows the simultaneous fitting of distributions of fitness effects (DFE)…
Predicts effectors in oomycete genomes, or with custom scripts for any genome.…
Simplifies the execution of existing short read aligners (SRA) on…
Gene expression array analysis
Permits researchers to conduct investigation and construct high-quality…
Calculates average amino-acid identity (AAI) between a query proteome and all…
Assists users for visualizing ancestry data. AncestryView first proceeds by…