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Songqian Huang - Aquatic biosciences
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Songqian Huang

Aquatic biosciences
University of Tokyo • Tokyo • Japan

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • BS-seq analysis
Languages
  • Chinese
  • English
  • Japanese
Programming languages
  • MATLAB
  • Perl
  • Python
  • R

Fields of interest

WGS analysis
Refines regulatory motifs. LMMO consists of a large-margin-type algorithm that…
Performs tree reconstruction based on the supermatrix paradigm. OneTwoTree is a…
Allows users to streamline the investigation and decision-making process for…
RNA-seq analysis
Provides a tool for the inference of viral transmissions. QUENTIN incorporates…
Serves as a fully automatic analysis of protein family conservation within a…
Handles enrichment heatmaps. EnrichedHeatmap is an R package able to gather…
BS-seq analysis
Provides a library written in Nim programming language that suits for simple…
Performs common tasks in metagenomic data analysis from raw read quality…
Predicts de novo profile generation based on sequence context. SPBuild…