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Sophie Nixon - Research Fellow (Environmental Microbiology)
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Sophie Nixon

Research Fellow (Environmental Microbiology)
University of Manchester • Manchester • United Kingdom

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • English

Fields of interest

WGS analysis
Permits detection of mosaic structural variants from linked-read exome and…
Permits to evaluate pleiotropy in a standard mendelian randomization (MR)…
Pinpoints the favored mutation with population genetics signals and boosting…
De novo sequencing analysis
Detects cancer driver genes. driverMAPS is an integrated statistical…
Serves to ChIP-seq Wig data. Wig is a standard file format, which in this…
Allows comparison and separation of orthology relationships. CAT uses the…
Metagenomic sequencing analysis
Assists users to find similarity between protein of interest and PDZ-proteins…
Serves for eukaryotic sequence identification and can be applied to…
Annotates and filtrates variant files. VarAFT allows the comparison of several…