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Soumita Podder - assistant professor
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Soumita Podder

assistant professor
Raiganj University • Rāiganj • India

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • Protein interaction analysis
Languages
  • English

Fields of interest

RNA-seq analysis
Performs tree reconstruction based on the supermatrix paradigm. OneTwoTree is a…
Provides a neighbor protein structure retrieval method. ContactLib scans…
Permits users to perform co-expression analysis. CNNC is an application that…
Metagenomic sequencing analysis
Facilitates phylostratigraphic analysis. phylostratr automates sequence…
Maps reads against multiple reference genomes. PanVC is designed for variant…
Maps bisulfite-treated short DNA reads to a reference genome. BisPin supports…
Protein interaction analysis
Allows to build a high-quality RNA-seq-based Gene Co-expression Network (GCN)…
Analyzes multiple gene co-expression networks associated with cancer…
Investigates relationships between human diseases and microbial communities.…